Michal Bozon wrote:
I would like to have some spheres transparent, but some spheres leave opaque. Or to have spheres with different transparencies. Is it possible?
Yes, it is. just tried it: PyMOL>set sphere_transparency,0.5 Setting: sphere_transparency set to 0.50000. PyMOL>set sphere_transparency,0.2,c1 Setting: sphere_transparency set to 0.20000 in object 'c1'. PyMOL>set sphere_transparency,0.8,c2 Setting: sphere_transparency set to 0.80000 in object 'c2'. PyMOL>rebuild Kristian Rother __________________________________________________ Do you Yahoo!? Yahoo! Platinum - Watch CBS' NCAA March Madness, live on your desktop! http://platinum.yahoo.com