Scott,
Currently they are hard-coded in the C, but can be changed after
loading the molecule using:
alter selection, vdw=number
for example:
alter elem c, vdw=1.8
alter elem n, vdw=1.4
alter elem h, vdw=1.1
etc.
Cheers,
Warren
--
mailto:war...@delanoscientific.com
Warren L. DeLano, Ph.D.
Principal Scientist
DeLano Scientific LLC
Voice (650)-346-1154
Fax (650)-593-4020
> -----Original Message-----
> From: pymol-users-ad...@lists.sourceforge.net [mailto:pymol-users-
> ad...@lists.sourceforge.net] On Behalf Of Scott Classen
> Sent: Friday, June 20, 2003 12:56 PM
> To: pymol-users@lists.sourceforge.net
> Subject: [PyMOL] default atomic radii
>
> Hi Warren,
> What are the default atomic radii in PyMol? How are they
> calculated/determined?
> Thanks,
> Scott Classen
>
>
> ==============================================
> Scott Classen, Ph.D.
> clas...@uclink4.berkeley.edu
> University of California, Berkeley
> Department of Molecular & Cell Biology
> 237 Hildebrand Hall #3206
> Berkeley, CA 94720-3206
> LAB 510.643.9491
> FAX 510.643.9290
> ==============================================
>
>
>
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