I have a problem representing the contact surface between, e.g., a protein
and its ligand.  The surface is displayed, but it is full of holes,
apparently at the points of contact.  The script:

load protein.pdb, protein
load ligand.pdb, ligand
hide everything
show surface, (protein and (ligand around 4))

gives something like one wants, but full of holes.

With that object displayed, if one says "show surface, protein" one gets the
full surface, without the holes.  Any ideas on how to get the *partial*
surface *without* the holes?

Joe Becker
Merck Research Labs

P.S.

load protein.pdb, protein
load ligand.pdb, ligand
hide everything
create junk, (protein and (ligand around 4))
show surface, junk

gives a similar (holey) result





------------------------------------------------------------------------------
Notice: This e-mail message, together with any attachments, contains 
information of Merck & Co., Inc. (Whitehouse Station, New Jersey, 
USA) that may be confidential, proprietary copyrighted and/or legally 
privileged, and is intended solely for the use of the individual or entity
named on this message. If you are not the intended recipient, and
have received this message in error, please immediately return this by 
e-mail and then delete it.
------------------------------------------------------------------------------

Reply via email to