Warren, That's exactly what I need for cutting down on the number of unnecessary files! Thank you!
(...wondering how many hidden goodies are out there...) Tina =) ----- Original Message ----- From: "Warren L. DeLano" <war...@delanoscientific.com> To: "'Tina Li'" <t...@bioinformaticssolutions.com>; <pymol-users@lists.sourceforge.net> Sent: Tuesday, September 09, 2003 8:42 PM Subject: RE: [PyMOL] alternative method for loading coordinates | Tina, | | If you're willing to switch into Python, there is an | undocumented "read_pdbstr" function which can take a PDB file as a | string variable. See modules/pymol/importing.py for the code. | Temporary files are unnecessary. | | However, I'm not sure that I completely understand your | question. | | Cheers, | Warren | | -- | mailto:war...@delanoscientific.com | Warren L. DeLano, Ph.D. | Principal Scientist | DeLano Scientific LLC | Voice (650)-346-1154 | Fax (650)-593-4020 | | > -----Original Message----- | > From: pymol-users-ad...@lists.sourceforge.net [mailto:pymol-users- | > ad...@lists.sourceforge.net] On Behalf Of Tina Li | > Sent: Tuesday, September 09, 2003 9:43 AM | > To: pymol-users@lists.sourceforge.net | > Subject: [PyMOL] alternative method for loading coordinates | > | > Hello, | > | > Is there an alternative loading PDB coordinates, other than "load | <file>"? | > Let's say after threading against a large database of protein | templates, I | > need one PyMOL script generated for each of the templates. I could as | well | > generate one PDB file for each to load, but it would be difficult to | > manage | > the few thousands of them. Is it possible to have the coordinates | included | > as | > part of the PyMOL script and say, "load this like how you load a PDB" | so | > that | > the later commands can work with whatever comes earlier in the file? | > | > Thanks, | > | > Tina | > | > | > | > | > ------------------------------------------------------- | > This sf.net email is sponsored by:ThinkGeek | > Welcome to geek heaven. | > http://thinkgeek.com/sf | > _______________________________________________ | > PyMOL-users mailing list | > PyMOL-users@lists.sourceforge.net | > https://lists.sourceforge.net/lists/listinfo/pymol-users | |
