Dear all, I am preparing a figure of a molecualr surface, colored by the hydrophobicity of surface residues. Can pymol do this job? How about showing atom C* in a color, and N* and O* in another color?
In fact I have tried GRASP but failed in coloring the surface. I used "r=hyd", but could not color the surface of those redisues. This is an old version of grasp (1.0?). I am not familiar with this program. If anybody can tell me the correct way of doing it in grasp, it will also be greatly appreciated. Rongjin Guan