I think the current way is to use the pk1 and pk2 selections. Assuming you're not using the distance wizard, Ctrl-right-click selects something as pk1 and gets rid of the other pkX selections. Double-right-click selects something as the next pkX selection. So .. Ctrl-right click to select the first atom. Then double-right-click to select the second atom. Then type "dist" to show the distance.
If you're using the distance wizard, you can use any combination of ctrl-right-clicks and double-right-clicks. (I have never used MacPyMOL, but I think this is the same across all PyMOLs) -michael > The ref manual says to measure distances you can ctrl-shift left, and > then right click to select the positions to measure. I can ctrl-shift > left click to select the first atom, but ctrl-shift right click doesnt > do anything. My workaround is to ctrl-shift left click twice, which > displays the path to the atom in the command history window. I can then > copy paste them in behind a dist command. > > Can anyone else confirm this behaviour? > > Thanks, > --Michael > > > > ------------------------------------------------------- > This SF.Net email is sponsored by: SourceForge.net Broadband > Sign-up now for SourceForge Broadband and get the fastest > 6.0/768 connection for only $19.95/mo for the first 3 months! > http://ads.osdn.com/?ad_id=2562&alloc_id=6184&op=click > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users >