I am attempting to have a script output a png image of a set of pdb files that I have in a directory. I can get the images out of pymol when using it in gui mode, but when I attempt to run in command line mode I get the following error:

ScenePNG-WARNING: writing a blank image buffer.
libpng error: Image width or height is zero in IHDR
ScenePNG-Error: error writing "PDB_Snapshot_iter_000001.pdb.png"! Please check directory...

This happens on both Linux and Mac

Any help is appreciated.

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J. Torin Huzil

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