Thanks Scott. I keep trying to mess with the non-bonded size instead
of the regular sphere size.
Alex
On Sep 8, 2004, at 2:38 PM, Scott Classen wrote:
Alex,
You need to create two separate objects one for your metal and another
for your water
create MG, (chain M)
create WAT, (chain W)
then you can change the properties of each object individually
set sphere_scale, 1.2, MG
set sphere_scale, 0.8, WAT
good luck,
Scott
On Sep 8, 2004, at 2:19 PM, Alex W. Smith wrote:
Is there a way to set the size of non-bonded spheres to two different
sizes within the same residue? For example, I have a metal ion with
a bound water and have both in the same residue but I want the metal
ion to be bigger than the water.
I have check the list archives and googled "PyMol non-bonded sphere
size" and have had no luck.
Suggestions?
Best regards,
Alex
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Scott Classen, Ph.D.
ACS Postdoctoral Fellow
Department of Molecular & Cell Biology
University of California, Berkeley
237 Hildebrand Hall #3206
Berkeley, CA 94720-3206
LAB 510.643.9491
FAX 510.643.9290
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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