Eiza, This isn't possible yet -- first someone needs to chemical recognition patterns, atom names, atom types, formal charges, partial charges and radii for nucliec acids to the dictionaries in the files:
PyMOL/modules/chempy/champ/amber99.py and PyMOL/modules/chempy/champ/formal_charges.py Cheers, Warren -- Warren L. DeLano, Ph.D. Principal Scientist . DeLano Scientific LLC . 400 Oyster Point Blvd., Suite 213 . South San Francisco, CA 94080 . Biz:(650)-872-0942 Tech:(650)-872-0834 . Fax:(650)-872-0273 Cell:(650)-346-1154 . mailto:war...@delsci.com > -----Original Message----- > From: pymol-users-ad...@lists.sourceforge.net > [mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of Eiza Yu > Sent: Tuesday, January 25, 2005 3:39 PM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] vacuum electrostatics for nucleic acids? > > hi! > > Is there a way to (qualitatively) visualize electrostatics of > nucleic acids with Pymol? I know this can be done for > proteins already. Thanks. > > Eiza Yu > graduate student >
