Hi Karen, There sure is a way to fix this. Use the following statements:
alter 96-103/, ss='S' alter 96-103/, ss='H' alter 96-103/, ss='L' to set residues 96-103 to beta Strand, alpha Helix, and Loop respectively. You can asssign your whole sequence this way from the Procheck assignments. Good Luck, Chris On Thu, 3 Mar 2005, Karen Champagne wrote: >Hi Everyone, > > PyMol is incorrectly assigning a couple of residues in my structure >as loop region where it should really be a beta strand (according to >procheck). I was wondering if there was any way to change this so I can >see the strand in the cartoon rendering? I am also having the same >problem for a helix portion. > >Thanks, >Karen > > > >------------------------------------------------------- >SF email is sponsored by - The IT Product Guide >Read honest & candid reviews on hundreds of IT Products from real users. >Discover which products truly live up to the hype. Start reading now. >http://ads.osdn.com/?ad_id=6595&alloc_id=14396&op=click >_______________________________________________ >PyMOL-users mailing list >PyMOL-users@lists.sourceforge.net >https://lists.sourceforge.net/lists/listinfo/pymol-users > Christopher L. Colbert, Ph.D. Research Associate Phone: (214) 648 5002 University of Texas Southwestern Medical Center FAX: (214) 648 5095 5323 Harry Hines Boulevard Dallas, TX 75390
