Huw,
I had the same problem last week but discovered that if you use "turn"
instead of "rotate" (e.g. turn y,90) then the electrostatic surface is
maintained.
Cheers
MGM
Martin Montgomery
Director's Group
MRC Dunn Human Nutrition Unit
Hills Road
Cambridge
CB2 2XY
www.mrc-dunn.cam.ac.uk
On 21 Mar 2005, at 12:37, Huw Jenkins wrote:
Hi
If you make an electrostatic map using the abps tools plugin and then
use rotate to change the orientation of the molecule the resulting
electrostatic surface is clearly not correct. It appears as if the
co-ordinates of the molecule have been rotated but those of the
electrostatic map have stayed the same. I have tried using rotate y,
180, apbs_map and rotate y, 180, all and clicking update on the
apbs_tools plugin visualisation tab but none of these restore the
correct electrostatic surface. The only solution is to continue
rotation about the y axis until the total rotation is 360 (i.e 0).
There was a post about this previously with a map created by GRASP.
Huw
--
Huw Jenkins
School of Chemistry
University of Edinburgh
West Mains Road
Edinburgh, EH9 3JJ
-------------------------------------------------------
SF email is sponsored by - The IT Product Guide
Read honest & candid reviews on hundreds of IT Products from real
users.
Discover which products truly live up to the hype. Start reading now.
http://ads.osdn.com/?ad_id=6595&alloc_id=14396&op=click
_______________________________________________
PyMOL-users mailing list
PyMOL-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/pymol-users
Martin Montgomery
Director's Group
MRC Dunn Human Nutrition Unit
Hills Road
Cambridge
CB2 2XY
