you could look into the pdb file to find out what residue number your ligand has. but i guess most often proteins and ligands have different chain ids.
On Tuesday 12 July 2005 12:25, Andrea Spitaleri wrote: > Hi, > thanks. that was my first answer and it works. > but in case the chain id are the same? > > and > > 2005/7/12, Marc Bruning <brun...@mpghdb.desy.de>: > > in case your ligand has a different chain id than your protein, you could > > use that to distinguish. > > > > On Tuesday 12 July 2005 11:59, Andrea Spitaleri wrote: > > > Hi all > > > is there any shortcut to select all aminoacid in a complex and not the > > > ligand? something like > > > select my, all and not "ligand" where I don't know the resn of the > > > ligand but in my script I should be able to discern between aminoacids > > > (ALA,VAL, etc...) and not. > > > thanks in advance > > > > > > Regards > > > > > > andrea > > > > > > > > > ------------------------------------------------------- > > > This SF.Net email is sponsored by the 'Do More With Dual!' webinar > > > happening July 14 at 8am PDT/11am EDT. We invite you to explore the > > > latest in dual core and dual graphics technology at this free one hour > > > event hosted by HP, AMD, and NVIDIA. To register visit > > > http://www.hp.com/go/dualwebinar > > > _______________________________________________ > > > PyMOL-users mailing list > > > PyMOL-users@lists.sourceforge.net > > > https://lists.sourceforge.net/lists/listinfo/pymol-users > > > > -- > > ..--.:..: > > ------------------------------------------------------- > This SF.Net email is sponsored by the 'Do More With Dual!' webinar > happening July 14 at 8am PDT/11am EDT. We invite you to explore the latest > in dual core and dual graphics technology at this free one hour event > hosted by HP, AMD, and NVIDIA. To register visit > http://www.hp.com/go/dualwebinar > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users -- ..--.:..:
