Hello All,How "physiological" are the structures that are produced from builder? Meaning, how are the angles, etc. determined? Might such a resulting structure mimic a chemically-synthesized peptide?
I have taken peptides I created using builder and done some MD simulations and the structures certainly change, but I wonder whether the changes are limited by the initial starting structure...which is, of course, a question for another mailing list, I suppose. ;)
james
