Michael,
thanks for your reply, this works fine for me. However, I thought there is a
nicer solution on setting the transparency for cgo's after creation.
Regards,
Yusuf
--
Yusuf Tanrikulu
Bioinformatics Diploma Student
Department of Biosciences
Johann-Wolfgang-Goethe Univerity Frankfurt
Siesmayerstrasse 70
60323 Frankfurt am Main
- Germany -
tanrik...@bioinformatik.uni-frankfurt.de
Quoting Michael George Lerner <mler...@umich.edu>:
Quoting tanri...@stud.uni-frankfurt.de:
# Hi everybody,
#
# i've just created many CGOs, which show up solid surfaces like
spheres and
# ellipsoids. Is it possible to set the transparency of some CGO's to
i.e. 0.5
# and leave the others solid?
# I've checked out the reference and the manual, and found something like:
#
# set transparency=0.5, object
#
# But this actually does not work for CGO's.
# Any ideas....
#
# Yusuf
The last time I looked at this, it seemed like the easiest (only?)
way to do this was to tweak the transparency at creation time. So, I
typically have functions that look like this:
def makeSphere(name,x,y,z,r,transparency=0,...):
...
obj = []
...
obj.extend([cgo.ALPHA,1-transparency])
obj.extend([cgo.SPHERE,x,y,z,r])
...
cmd.load_cgo(obj,name,1)
I don't know how to change it later, though.
Hope that helps,
-michael
#
#
# --
# Yusuf Tanrikulu
# Bioinformatics Diploma Student
# Department of Biosciences
# Johann-Wolfgang-Goethe Univerity Frankfurt
# Siesmayerstrasse 70
# 60326 Frankfurt am Main
# - Germany -
# tanrik...@bioinformatik.uni-frankfurt.de
#
#
-------------------------------------------------------
SF.Net email is Sponsored by the Better Software Conference & EXPO
September 19-22, 2005 * San Francisco, CA * Development Lifecycle Practices
Agile & Plan-Driven Development * Managing Projects & Teams * Testing & QA
Security * Process Improvement & Measurement * http://www.sqe.com/bsce5sf
_______________________________________________
PyMOL-users mailing list
PyMOL-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/pymol-users
