Provided objects are moved in their entiretly, recent PyMOL betas may provide what you want via
cmd.get_object_matrix(object-name) Cheers, Warren -- Warren L. DeLano, Ph.D. Principal Scientist . DeLano Scientific LLC . 400 Oyster Point Blvd., Suite 213 . South San Francisco, CA 94080 USA . Biz:(650)-872-0942 Tech:(650)-872-0834 . Fax:(650)-872-0273 Cell:(650)-346-1154 . mailto:war...@delsci.com > -----Original Message----- > From: pymol-users-ad...@lists.sourceforge.net > [mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of > Xavier Siebert > Sent: Friday, September 16, 2005 10:01 AM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] rot+trsl matrices > > Hello, > > I would like to dock several molecules into a map and display > a score in real time (i.e., as the molecules are moved around > with the mouse). > > For that I have to retrieve the rotation+translation matrix > for each molecule while it is being moved around, to feed it > into a scoring algorithm. > > Do you know how to get these matrices ? > Thank you ! > --X. > > ------------------------------------------------- > Xavier Siebert, Ph.D. > Laboratoire de Virologie Mole(c)culaire & Structurale UMR 2472 CNRS-GIF > 1 Av. de la Terrasse, Bat. 14 B > 91198 Gif-sur-Yvette, FRANCE > > tel : (++33)-1-69.82.38.56 > fax : (++33)-1-69.82.43.08 > > > ------------------------------------------------------- > SF.Net email is sponsored by: > Tame your development challenges with Apache's Geronimo App Server. > Download it for free - -and be entered to win a 42" plasma tv > or your very own Sony(tm)PSP. Click here to play: > http://sourceforge.net/geronimo.php > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users > > > >
