| | As a follow up to my last email asking whether there is a way to make 3D | grid representations of molecules.... I have found a picture of the kind | of thing I am after. Is there a way to make anything similar to this | http://www.techfak.uni-bielefeld.de/ags/ai/projects/docking/images/align.2ptci-6pti_small.png | with PyMol?
If you don't mind using spheres or cylinders instead of cubes (or whatever they are in that image), this is quite easy using CGO in pymol. See http://pymol.sourceforge.net/newman/user/S0500cgo.html#14 Terry
