Balaji:
I've done this by making a surface of just the domain I want to
highlight, then bring it into Photoshop. Select the background, then
invert the selection. Then convert selection to path and then stroke
the path.
Here is an example:
[ Attachment only sent to Balaji, available on request ]
Layer 0 is a regular surface of the residues involved in a dimer
interface. Layer 1 is the stroked path. Layer 2 is a surface with
charge potential of the entire region. Displaying Layer 1 and Layer
2 gives the desired figure.
Have fun,
Mark
Date: Wed, 19 Oct 2005 15:44:35 -0400
From: Balaji Bhyravbhatla <balaji.bhyravbha...@umassmed.edu>
To: pymol-users@lists.sourceforge.net
Subject: [PyMOL] edgelines between molecules
Hello All,
I have a large mega-dalton multi chain structure that I would like to
make an overview (surface) figure. Instead of using many colors
(13subunits)
I would like to use one color and demarcate the subunits by some other
means.One way would be to generate some sort of edge lines between the
molecules. Is that possible, if so how?
If anyone has any other suggestions please send them my way, it
would be
highly appreciated.
Thanks
Balaji
_________________________________
Mark A. Saper, Ph.D.
Associate Professor of Biological Chemistry
Biophysics Research Division, University of Michigan
Chemistry Building Room 3040
930 N University Ave
Ann Arbor MI 48109-1055 U.S.A.
sa...@umich.edu (734) 764-3353 fax (734) 764-3323
http://www.biochem.med.umich.edu/biochem/research/profiles/saper.html
