Hi All, Is there any possibility that Pymol may have the ability to "intelligently" superimpose two(or more) structures, without requiring the user to fiddle with selecting exactly the same number of atoms/residues. The "align" command fails pathetically in many instances, case in point, try aligning (or fitting) 3HCK and 2SRC.
In this scenario, DeepView (Swiss PDB Viewer) excels fantastically. Just select "Magic Fit" or "Iterative Magic Fit" from the "Fit" menu, then select the structures and alignment level from a simple drop down menu and viola! I wonder how they do it. (And lament that DeepView is no longer being developed). Apologies for sounding so trollish! Best, Shiven -- ___________________________________________________ Play 100s of games for FREE! http://games.mail.com/
