Hi,I want to generate a figure that shows clearly the conformation change upon ligand-binding in 3tga(unbound) and 1mtw (ligand bound). The ligand-binding site is a small pocket in the 3tga and is bigger pocket in bound structure. The loops of resi 190-195 strech to allow ligand binds. I want a figure that can show the conformation change of the loops of resi 190-195 and also the change of the pocket.
Can anyone give me a hint?
Thanks Bingding
