That's not a very helpful response, as it may not be clear how one maps an atom selection in Pymol to the corresponding line in a PDB file.
To print out the coordinates within Pymol, you need to use the command iterate_state, e.g.: iterate_state 1, <selection_name>, print x,y,z Where <selection_name> is the name of the object for the atom(s) you've selected, and x, y, &z are the coordinates of the atom(s). Scott -- Scott P Brown, PhD Senior R&D Computational Scientist Abbott Laboratories Dept R42T / Bldg AP10-LL 100 Abbott Park Rd Abbott Park, IL 60064-6115 "D. Joe Anderson" <[email protected]> Sent by: [email protected] 07/06/2006 09:10 AM To [email protected] cc Subject Re: [PyMOL] How do you show the coordinates of an atom? On Wed, Jul 05, 2006 at 04:33:16PM -0400, John Anderson wrote: > or are the coordinates in the pdb file? They are, yes. -- D. Joe
