hide nonbonded should remove these. They must be in your pdb file somewhere: waters, metals something.
Cheers, JTM "We can be sure that if a detailed understanding of the molecular basis of chemo-therapeutic activity were to be obtained, the advance of medicine would be greatly accelerated." Linus Pauling, Nobel Laureate 1954 "...everything that living things do can be understood in terms of the jigglings and wigglings of atoms." Richard Feynman, Nobel Laureate 1965 **************************************** Jason Thomas Maynes, MD/PhD Department of Biochemistry and Molecular Biophysics Resident in Anaesthesia and Paediatrics Faculty of Medicine Washington University in St. Louis jmay...@biochem.wustl.edu **************************************** > Hi All, > > In the image linked below, there are a bunch of colored "jacks" that I > can't > seem to hide. I know some are ions, and I can remove those, but others > are > just oxygens and carbons. I can eliminate them one-by-one by hand, but > it's > a chore because they keep turning up -- unfortunately much clearer when > the > image is ray-traced. Any ideas about what they might be? > > http://www.nmr.mgh.harvard.edu/~kdevaney/img.png<http://www.nmr.mgh.harvard.edu/%7Ekdevaney/img.png> > > > Thanks, > > Aaron > ------------------------------------------------------------------------- > Using Tomcat but need to do more? Need to support web services, security? > Get stuff done quickly with pre-integrated technology to make your job > easier > Download IBM WebSphere Application Server v.1.0.1 based on Apache Geronimo > http://sel.as-us.falkag.net/sel?cmd=lnk&kid=120709&bid=263057&dat=121642_______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users >
