PyMOL may somehow be importing a conflicting .py or .so.
Is "." in your path? It may be in PyMOL's default sys.path...hmm...
Also note that
> ${PYMOL_PATH}/__init__.py $*
is better as
> ${PYMOL_PATH}/__init__.py "$@"
Cheers,
DeLano Scientific LLC
Email Support Services
> -----Original Message-----
> From: pymol-users-boun...@lists.sourceforge.net
> [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf
> Of Martin Hofling
> Sent: Monday, November 20, 2006 6:37 AM
> To: pymol-users@lists.sourceforge.net
> Subject: [PyMOL] weird crashes inside /home/$USER
>
> Hi everybody,
>
> i install pymol via svn ebuild (attached). It crashes with a
> segfault but only if i am inside my home directory. If i am
> outside, everything works fine.
>
> Any ideas what this could be related to?
>
> OpenGL graphics engine:
> GL_VENDOR: NVIDIA Corporation
> GL_RENDERER: GeForce 6600/PCI/SSE2
> GL_VERSION: 2.1.0 NVIDIA 96.29
> Adapting to GeForce hardware.
> Detected 2 CPUs. Enabled multithreaded rendering.
> /usr/bin/pymol: line 6: 12230 Segmentation fault python
> ${PYMOL_PATH}/__init__.py $*
>
> pymol start script says...
>
> mar...@osgiliath ~ $ cat /usr/bin/pymol
> #!/bin/sh
> PYMOL_PATH=/usr/lib/python2.4/site-packages/pymol
> PYMOL_DATA="/usr/share/pymol/data"
> PYMOL_SCRIPTS="/usr/share/pymol/scripts"
> export PYMOL_PATH PYMOL_DATA PYMOL_SCRIPTS python
> ${PYMOL_PATH}/__init__.py $*
>
> ... which looks good to me.
>
> Cheers
> Martin
>
