Hi -
I installed apbs and tools (0.4.0) in a Linux box.
I then specified the location of psize.py and apbs executable.
when i load a protein and click on 'set grid' according to
instructions I get on a new window a rather cryptic response:
Error: 6
ValueError Exception in Tk callback
Function: <function <lambda> at 0x414cfbc4> (type: <type 'function'>)
Args: ()
Traceback (innermost last):
File "/Xsoftware/pymol/ext/lib/python2.3/Pmw/Pmw_1_2/lib/
PmwBase.py", line 1747, in __call__
return apply(self.func, args)
File "/Xsoftware/pymol/ext/lib/python2.3/Pmw/Pmw_1_2/lib/
PmwDialog.py", line 153, in <lambda>
command=lambda self=self, name=name: self._doCommand(name))
File "/Xsoftware/pymol/ext/lib/python2.3/Pmw/Pmw_1_2/lib/
PmwDialog.py", line 132, in _doCommand
return command(name)
File "/Xsoftware/pymol/modules/pmg_tk/startup/apbs_tools.py", line
1055, in execute
self.runPsize()
File "/Xsoftware/pymol/modules/pmg_tk/startup/apbs_tools.py", line
1096, in runPsize
size.runPsize(pdb_filename)
File "/usr/local/apbs-0.4.0/tools/manip/psize.py", line 267, in
runPsize
self.parseInput(filename)
File "/usr/local/apbs-0.4.0/tools/manip/psize.py", line 102, in
parseInput
self.parseLines(file.readlines())
File "/usr/local/apbs-0.4.0/tools/manip/psize.py", line 116, in
parseLines
self.q = self.q + float(words[3])
ValueError: invalid literal for float(): 1.00119.63
Any clues ?
A.
