Marco, If you haven't found a workable solution, you may try this little trick of stuffing values into the B Factor column (as someone previously mentioned).
I just posted something about this on the wiki not too long ago. The script should make things clear if you're still unsure how to continue. http://www.pymolwiki.org/index.php/Color#Reassigning_B-Factors_and_Coloring Regards, -- Jason On Tuesday 06 March 2007 09:03, pymol-users-requ...@lists.sourceforge.net wrote: > Message: 2 > Date: Tue, 6 Mar 2007 11:19:44 +0100 > From: "Gerebtzoff, Gregori" <gregori.gerebtz...@roche.com> > Subject: Re: [PyMOL] Electrostatic surface visualization > To: <se...@uniroma2.it>, <pymol-users@lists.sourceforge.net> > Message-ID: > <a4dfb50223089d468de79aac4018791139d...@rkamsem3.emea.roche.com> > Content-Type: text/plain; charset="US-ASCII" > > Marco, > > Maybe you could replace (alter) the B-factor of your protein with the > electrostatic values, and color it accordingly; some googling should > give you more hints about how you could solve this issue, like > http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/data2bfactor.py > and > http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/color_b.py > from Robert Campbell. > A lot of useful scripts are posted on his website: > http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/ > > Cheers, > > Greg -- Jason Vertrees (javer...@utmb.edu) Doctoral Student Biophysical, Structural & Computational Biology Program University of Texas Medical Branch Galveston, Texas http://www.best.utmb.edu/ http://www.pymolwiki.org/
