Hi Hasan,

Start with the structures superimposed and translate/rotate one/both
away from the/each other. Glue the images together in reversed order
and no one will see the difference...
By the way, it might be nice to start with small
translations/rotations and have them increase quadratically in size,
so that when you play it in reverse, it seems to slow down, as if you
were being more careful and precise aligning the things... ;)

Hope it helps,

Tsjerk

On 8/14/07, Demirci, Hasan <hasan_demi...@brown.edu> wrote:
>
> Hi,
> I have two pdb files that I want to superimpose them onto each other. (I know 
> how to do this part)
> however, at the same time i want to generate a movie showing those two pdb 
> files going into each other.
> Does anyone know how to do it?
> Thanks in advance.
>
> Hasan Demirci
> Department of Molecular Biology, Cellular Biology & Biochemistry
> Brown University
> 69 Brown Street
> Providence, RI    02912
>
> (401) 863-3652 lab
> (401) 226-7852 cell
>
> hasan_demi...@brown.edu
>
>
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-- 
Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands
P: +31-30-2539931
F: +31-30-2537623

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