pseudoatom tmp, pos=[X, Y, Z] show sticks, tmp expand R delete tmp Working example:
load $TUT/1hpv.pdb pseudoatom tmp, pos=[10.0, 17.0, -3.0] show sticks, tmp expand 6 delete tmp But like Tsjerk says, you might want to do something more like: delete all load $TUT/1hpv.pdb show sticks, byres (organic expand 5) color yellow, organic and elem c Cheers, Warren -- DeLano Scientific LLC Subscriber Support Services mailto:del...@delsci.info > -----Original Message----- > From: pymol-users-boun...@lists.sourceforge.net > [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf > Of Horacio Emilio Pérez Sánchez > Sent: Friday, March 28, 2008 1:42 PM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] Show sticks till a certain radius > > Hi, > > Given a receptor in cartoon representation and a ligand > (sticks) in its cavity, center of mass x, y, z, I wonder how > could I get the sticks representation of the protein (in > addition to cartoon) but only in a region limited by a sphere > of radius "R", with center at x, y, z. > > Thanks in advance > > Horacio > > > > > -------------------------------------------------------------- > ----------- > Check out the new SourceForge.net Marketplace. > It's the best place to buy or sell services for just about > anything Open Source. > http://ad.doubleclick.net/clk;164216239;13503038;w?http://sf.n et/marketplace > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users
