Yes. set cartoon_side_chain_helper -- DeLano Scientific LLC Subscriber Support Services mailto:[email protected]
-----Original Message----- From: [email protected] [mailto:[email protected]] On Behalf Of Alex Reynolds Sent: Monday, June 16, 2008 1:55 PM To: [email protected] Subject: [PyMOL] Appearance of nucleotides in DNA I am looking at a PDB file (2STW) which has a protein bound to a segment of DNA. I am show-ing the DNA strands in "cartoon" fashion, which renders nucleotides as little stubs. To make the base composition clearer, I then select the chain elements to "show-as-stick" to show the nucleotides, also leaving the backbone chains in cartoon mode My problem is that "nubs" of the nucleotides stick out of the backbone. Is there a way to hide them? When I select the nub associated with the nucleotide, this seems to select all the atoms associated with the nucleotide, and not the nub. Sorry if this is a dumb question, and thanks for any tips. -Alex -- Alex Reynolds University of Washington Medical Genetics 2211 Elliot Seattle, WA 98121 [email protected] ------------------------------------------------------------------------- Check out the new SourceForge.net Marketplace. It's the best place to buy or sell services for just about anything Open Source. http://sourceforge.net/services/buy/index.php _______________________________________________ PyMOL-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/pymol-users
