Ankit,
This has been detailed on the PyMOLWiki. All you need is (1) a structure and
(2) a text file with one number for each residue. To make it more accurate,
you can do one number per atom, but then the script(s) will need to be
changed a little.
So, check out
http://www.pymolwiki.org/index.php/Color#Reassigning_B-Factors_and_Coloring
and the section following it, called "Expanding to Surface" and you should be
set. Let me know if this isn't clear enough.
-- Jason
> Hi
>
> I want my chemical shift perturbation data to be mapped to the stucture. I
> am trying different things such as trying to get it to b-factor like
> position but haven't been successful. Is there any way I can get the data
> to be shown in pdb with various colors representing low/high perturbation
> in chemical shifts?
>
> Ankit
--
Jason Vertrees, PhD
Dartmouth: j...@cs.dartmouth.edu (new)
UTMB: javer...@utmb.edu (old)
http://www.best.utmb.edu/
http://www.pymolwiki.org/
