Doug, Unfortunately, I do not think is not possible: PyMOL requires a full backbone in order to reliably generate cartoon geometries other than a simply backbone tube. Sorry!
Cheers, Warren -- DeLano Scientific LLC Subscriber Support Services mailto:supp...@delsci.com -----Original Message----- From: pymol-users-boun...@lists.sourceforge.net [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf Of Douglas Kojetin Sent: Monday, July 28, 2008 10:24 AM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] c-alpha only model & show cartoon Hi All, ( I am unable to search the PyMOL mailing list archives for this question, per this message: http://sourceforge.net/mailarchive/forum.php?thread_name=200807281639.m6SGcv Ae006759%40apollo.hosting4less.com&forum_name=pymol-users ) How can a cartoon cylinder diagram be displayed for a c-alpha only model? "show cartoon" and "set cartoon_cylindrical_helices, 1" only seems to show a smooth backbone trace. Thanks, Doug ------------------------------------------------------------------------- This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK & win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100&url=/ _______________________________________________ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users
