Hello, I have 21 pdb files in my folder. I wrote a small script to load them all at once to the Pymol
********************************************** import os import re from os.path import join, getsize p = re.compile('[A-Za-z\.]*pdb') w = re.compile('nowater') for root, dirs, files in os.walk('./'): for file in files: if p.search(file) and w.search(file): cmd.load(file) ********************************************** Now I see them in the viewer window. I want to align 20 of them to the remaining one structure and to be able to store the RMSD in external file. Could this be done automatically? I am asking because I typed `help align` and found no API for it. Thanks for your help. SDA