Hi, I try to write a script able to reorient a protein and to save (in a pdb format) the reoriented structure. I have a problem during the saving phase of my script.
When I use the update function some atoms are not tacken into account. Typically, if several atoms have the same name (for example HB of a sidechain) only the first one is updated. This leads to a final wrote structure with a series of atoms badly positionned. Do you have any idea to solve this problem ? Thank you for your help S. Conilleau