On 13:10 Thu 29 Jan     , Abhinav Kumar wrote:
> Is there someway to select and show conserved residues when a bunch of 
> superimposed structures are loaded into Pymol?
> And if so, can identical and similar residues be selected separately?

I often use ConSurf, which will give you a PDB with a conservation index 
in the B-factor field. You can then load that into PyMol and color by B 
as usual.

Since it's unclear exactly what you intend to do with this, I can't tell 
you whether ConSurf makes sense for your use.

-- 
Thanks,
Donnie

Donnie Berkholz
Developer, Gentoo Linux
Blog: http://dberkholz.wordpress.com

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