Add: cmd.set("surface_mode",1) cmd.set("mesh_mode",1)
> -----Original Message----- > From: petr benes [mailto:xbe...@centrum.cz] > Sent: Friday, March 06, 2009 7:21 PM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] model refuses to display surface and mesh > > Dear pyMol users, > I am trying to load a simple model using python into pymol using the > following script. All works perfectly until i click for this new model to > display its surface or mesh. The other thing is that in older versions > 0.99rc the surface and mesh were correctly displayed, however this works > no longer with 1.1 version > Does anyone know how to fix the issue? Thanks. Petr Benes > > from chempy.models import Indexed > from chempy import Bond, Atom > from whrandom import random > from pymol import cmd > > model = Indexed() > > # create some atoms > > for a in range(1,11): > at = Atom() > at.name = "X%02d"%a > at.coord = [random()*5,random()*5,random()*5] > at.vdw = 2.0 > model.atom.append(at) > > # now create some bonds > > for a in range(1,10): > bd = Bond() > bd.index = [a-1,a] # zero-based indices! > model.bond.append(bd) > > # now load and label > > cmd.load_model(model,"example") > cmd.label("example","name") > > > > > -------------------------------------------------------------------------- > ---- > Open Source Business Conference (OSBC), March 24-25, 2009, San Francisco, > CA > -OSBC tackles the biggest issue in open source: Open Sourcing the > Enterprise > -Strategies to boost innovation and cut costs with open source > participation > -Receive a $600 discount off the registration fee with the source code: > SFAD > http://p.sf.net/sfu/XcvMzF8H > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users