Hi Baptiste, > I have a small helical pseudopeptide with mixed alpha and beta > amino-acids. How can I make a cartoon representation of this helix with > Pymol? For the moment, I have selected the peptide backbone atoms and > tried the "alter" command to force pymol to recognize the helix but it > do not work.
are you sure? What happens if you try this: alter all, ss='H' as cartoon rebuild Cheers, Thomas -- Thomas Holder MPI for Developmental Biology Spemannstr. 35 D-72076 Tübingen ------------------------------------------------------------------------------ uberSVN's rich system and user administration capabilities and model configuration take the hassle out of deploying and managing Subversion and the tools developers use with it. Learn more about uberSVN and get a free download at: http://p.sf.net/sfu/wandisco-dev2dev _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
