Is this a .pdb file which can be opened with pymol?
Can you provide a file that pymol accepts?
Can you in some way find the id number?
Check out these commands in pymol:
print cmd.get_names()
print cmd.get_pdbstr("chain A")
print cmd.get_pdbstr("chain A").splitlines()
print cmd.get_pdbstr("chain A").splitlines()[3]
print cmd.identify("chain A and name N")[0]
print cmd.identify("chain A and name C")[-1]
Troels Emtekær Linnet
Karl-Liebknecht-Straße 53, 2 RE <http://maps.google.dk/>
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Mobil: +49 1577-8944752
2011/8/22 Yotam Avital <yota...@gmail.com>
> Hi.
>
> I have a xyz file in the following form:
>
> C 0 0 0
> O 0 0 1
> O 0 0 2
> C 0 0 6
> O 0 0 5
> O 0 0 4
> .
> .
> .
>
> How can I select an atom from the list? How can I measure an atom from that
> list?
> --
> My other email account has a "professional" signature.
>
>
>
> ------------------------------------------------------------------------------
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> configuration take the hassle out of deploying and managing Subversion and
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>
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------------------------------------------------------------------------------
uberSVN's rich system and user administration capabilities and model
configuration take the hassle out of deploying and managing Subversion and
the tools developers use with it. Learn more about uberSVN and get a free
download at: http://p.sf.net/sfu/wandisco-dev2dev
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