Thanks.

I'm sorry but this is too complected. Currently, I can't afford the time to
learn another scripting  languish. Consider gnuplot script files, which are
simply a list of gnuplot commands. Sure you can do some sophisticated stuff
but you don't have to. All my files will be simple atom list in xyz
format (name
\t x \t y \t z), and all I want to do is select all the atoms of a certain
name, color them and then rotate the system.

Once again, I thank you for any help.

2011/9/11 Troels Emtekær Linnet <tlin...@gmail.com>

> Well, not hard.
>
> I made a script that can rotate a molecule around a line.
> And I made a large tutorial to take one through the available functions of
> this script.
> It is a pymol command file, ".pml".
>
> Check out:
> http://www.pymolwiki.org/index.php/Rotkit
>
>
> Troels Emtekær Linnet
> Karl-Liebknecht-Straße 53, 2 RE <http://maps.google.dk/>
> 04107 Leipzig, Tyskland
> Mobil: +49 1577-8944752
>
>
>
> 2011/9/11 Yotam Avital <yota...@gmail.com>
>
>>  Hi.
>>
>> How hard it is to write a (python?) script that will rotate the figure and
>> color some atoms? Nothing fancy... I searched a little bit but couldn't find
>> a quick and dirty tutorial for script writing.
>>
>> Thanks
>>
>> --
>> My other email account has a "professional" signature.
>>
>>
>>
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>


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