Hi Li,
align A, B
print cmd.get_object_matrix("A")
Please read http://www.pymolwiki.org/index.php/Object_Matrix and
http://www.pymolwiki.org/index.php/Get_object_matrix to find out how
to read the object matrices.
Cheers,
-- Jason
On Thu, Sep 15, 2011 at 1:03 PM, Li Xue <me.li...@gmail.com> wrote:
> Hello,
>
> I have two PDB files A.pdb and B.pdb. I used the command “align” to align A
> and B. Does anyone know how to get the final translation vector used by the
> command 'align' to align A and B?
>
> Thank you.
>
> Li
>
> --
> Xue, Li
>
>
> ------------------------------------------------------------------------------
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> What are the key obstacles that have prevented many mid-market businesses
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--
Jason Vertrees, PhD
PyMOL Product Manager
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(o) +1 (603) 374-7120
------------------------------------------------------------------------------
Doing More with Less: The Next Generation Virtual Desktop
What are the key obstacles that have prevented many mid-market businesses
from deploying virtual desktops? How do next-generation virtual desktops
provide companies an easier-to-deploy, easier-to-manage and more affordable
virtual desktop model.http://www.accelacomm.com/jaw/sfnl/114/51426474/
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