> First is that you need to call pymol.start() before calling any of the 
> pymol.cmd methods.

Thanks Guido and Jason - this did indeed get things working for me. 

> By the way, here is a screenshot of a Qt based app I did that uses embedded 
> pymol.


That looks pretty cool - very impressive! I'm thinking of writing some tool for 
selecting molecular fragments and those 'icons' look great. I'd be very 
interested in reading your tutorials when you're done. 

Thanks again, Dan

Dan O'Donovan Ph.D
SBGrid Consortium
Harvard Medical School




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