Thank you everybody, with your advices, i have finally obtained what i want. 

Cheers 

Stephane
________________________________________
De : Jason Vertrees [[email protected]]
Date d'envoi : mardi 15 novembre 2011 00:08
À : ABEL Stephane 175950
Cc : [email protected]
Objet : Re: [PyMOL] Create a dummy atom

Stephane,

COM should return the coordinates:

theCenter = COM(...)
pseudoatom theAtom, pos=theCenter

Cheers,

-- Jason

On Mon, Nov 14, 2011 at 5:44 PM, ABEL Stephane 175950
<[email protected]> wrote:
> Thank you Jason and Troels for your quick response.
>
> I have an additional question. Now if i want to pass the COM coordinates x, y 
> and z obtained with the COM script  in the pseudoatom pos. For example to use 
> in the script
>
> How i can do that ?
>
> Thank you again for your response.
>
> Stephane


--
Jason Vertrees, PhD
PyMOL Product Manager
Schrodinger, LLC

(e) [email protected]
(o) +1 (603) 374-7120

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