The problem I'm referring to is here:
http://www.pymolwiki.org/index.php/Contact_map_visualizer
From: bell_beaut...@hotmail.com
To: pymol-users@lists.sourceforge.net
Subject: Installed Gromacs but generate contact map using g_mdmat (Gromacs)
still failed
Date: Mon, 12 Mar 2012 08:57:11 +1200
Hello.
We've just successfully installed Gromacs on Ubuntu Linux (Virtual Machine) but
the problem is when running g_mdmat from Gromacs package by the following
command
g_mdmat -f 2p31.pdb -s 2p31.pdb -mean contact-map.xpm
The result gives me 'no command found'
Perhaps we haven't connected Gromacs to PyMOL to make this work?
Please help.
Regards,Suhaila.
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