Or overload the cmd.load function:
python
from pymol import cmd, preset
load_orig = cmd.load
def load_new(*args, **kwargs):
load_orig(*args, **kwargs)
preset.ligand_cartoon('all')
cmd.load = load_new
python end
Cheers,
Thomas
Jason Vertrees wrote, On 07/11/12 22:06:
> John,
>
> Put this in your ~/.pymolrc:
>
> import pymol
>
> def my_load(file,obj):
> cmd.load(file,obj)
> preset.ligand_cartoon(obj)
>
> cmd.extend("my_load", my_load)
>
> Then you can load files as,
>
> my_load /path/to/file, object_name
>
>
> Cheers,
>
> -- Jason
>
> On Wed, Jul 11, 2012 at 12:48 PM, John Amraph <[email protected]> wrote:
>> Dear collegues,
>>
>> I need your help in following question. I want to visualize pdb in the
>> preset.ligand_cartoon("all",_self=cmd) mode when Pymol is opening the pdb
>> file.
>> I tried several options:
>>
>> include preset.ligand_cartoon("all",_self=cmd) in pymolrc
>> making a pymol script(from pymol import cmd\
>> preset.ligand_cartoon("all",_self=cmd)) and adding run script.py in pymolrc
>>
>> But that doesn't work.
>>
>> Thank you!
>> John Amraph
>>
>> PS: OS - Win7, pymol v0.9
--
Thomas Holder
MPI for Developmental Biology
Spemannstr. 35
D-72076 Tübingen
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