Hi Anasuya, "br." is short for "byres" (by residue). So just drop that from your selection expression.
select site, (resn FAD and chain A and resi 45) around 4.5 and not HET Cheers, Thomas Anasuya Dighe wrote, On 07/23/12 09:00: > Hi Pymol-users, > > I need to select only the atoms [and NOT complete amino acid residues] which > are > lying in a radius of 4.5 Angstroms from the ligand from a ligand-bound protein > structure. > I am aware that the command: select site, br. resn FAD and chain A and resi 45 > around 4.5 and not HET selects complete amino acid residues which are lying > in the vicinity of the ligand within a radius of 4.5 Angstroms. > However, I am only interested in selecting all the atoms which are present in > this region and "not the complete amino acid residues." > How can this be done? > Please let me know. > > - Anasuya -- Thomas Holder MPI for Developmental Biology Spemannstr. 35 D-72076 Tübingen ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
