Hi,
I have generated isopotential surfaces for a protein that completely
enclose the basic structure using the APBS plugin.
I can increase the transparency so I can visualize an underlying
cartoon representation of the structure.
However, when I do a ray tracing to get a publication quality image, I
only get the isopotential surface - the ray tracing seems to view the surface
as 0% transparent, contrary to the settings that were used to visualize the
image in the first place.
Is this a bug, or am I missing some step that allows the ray tracing to
handle a partially transparent surface?
Thanks in advance for any advice.
Warren Gallin
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