Hi Osvaldo,

> when I run the clean command (I tried with different molecules and file
> formats) I get
>
>  Cleaning 176 atoms.  Please wait...
> *** buffer overflow detected ***: /opt/freemol/freemol/bin/mengine.exe
> terminated

Thanks for being patient on this, I just now had time to look at this.
Please edit the file freemol/src/mengine/field.c, at line 7, and
change

    char    vdwtype[11]

to

    char    vdwtype[14]

Once you've done that, please remove all the .o files and rebuild
mengine. If this helped you, let me know and I can update freemol.

Cheers,

-- Jason

-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrödinger, Inc.

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

------------------------------------------------------------------------------
Don't let slow site performance ruin your business. Deploy New Relic APM
Deploy New Relic app performance management and know exactly
what is happening inside your Ruby, Python, PHP, Java, and .NET app
Try New Relic at no cost today and get our sweet Data Nerd shirt too!
http://p.sf.net/sfu/newrelic-dev2dev
_______________________________________________
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net

Reply via email to