Hi Gary, actually PyMOL should be optimized for red/cyan and not green/magenta. There is no option to change the colors, sorry.
In PyMOL 1.5 anaglyph has been improved and there are is an "anaglyph_mode" settings which defaults to 4 ("optimized anaglyph"). Other reasonable values are 3 ("half-color") and 1 (gray). http://pymol.org/dsc/dokuwiki/doku.php?id=setting:anaglyph_mode If you really need to change the colors, you could take the open-source code and tweak the anaglyph_mode matrix in layer1/Scene.c Hope that helps. Cheers, Thomas Gary Hunter wrote, On 06/17/13 09:53: > Is there a way to customise the colours used in anaglyph stereo mode? > Anaglyph mode has been optimised for green/magenta glasses but I have > lots of red/cyan ones so I'd like to change the colours used if I can. > Gary > > Prof. Gary J. Hunter, > Department of Physiology and Biochemistry > University of Malta, Msida, MSD 2080, Malta. > phone: +356 2340 2917 > phone: +356 21316655 (secretary), Fax: +356 21310577 > http://www.um.edu.mt/ms/physbiochem -- Thomas Holder PyMOL Developer Schrödinger Contractor ------------------------------------------------------------------------------ This SF.net email is sponsored by Windows: Build for Windows Store. http://p.sf.net/sfu/windows-dev2dev _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net