Hi Neshatul, try "spheroid":
PyMOL> fetch 1nmr, async=0 PyMOL> spheroid 1nmr To relax locally distorted structure, you can use sculpting: PyMOL> fetch 1nmr, async=0 PyMOL> sculpt_activate 1nmr, 1 PyMOL> spheroid 1nmr PyMOL> set sculpting, 1 # ... until you like it PyMOL> set sculpting, 0 Hope that helps. Cheers, Thomas neshat haq wrote, On 06/23/13 19:22: > How can we convert a 10 structure in apdb file to an approximate average. > Is there any plugin or tool? > I once tried average3d.py from mura lab but that average structure is > duplicate of the first structure we opt. > > Anyways any suggestion will be appriciated. -- Thomas Holder PyMOL Developer Schrödinger Contractor ------------------------------------------------------------------------------ This SF.net email is sponsored by Windows: Build for Windows Store. http://p.sf.net/sfu/windows-dev2dev _______________________________________________ PyMOL-users mailing list ([email protected]) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/[email protected]
