Hi Osvaldo,

This isn't built in yet. But, if you need to do that, you can edit the
Python picked files found here:

pymol/data/chempy/fragments

Cheers

-- Jason

On Thu, Oct 10, 2013 at 2:41 PM, Osvaldo Martin <aloctavo...@gmail.com> wrote:
>
> I am using the comand cmd.fab() to create small peptides. There is an easy
> option to add neutral aminoacids? The default behaviour is to add charged
> amino acids with the charge of the free amino acid in solution at pH = 7
> i.e. Lys and Arg protonated and Glu, Asp and His unprotonated.
>
> Thanks in advance.
>
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-- 
Jason Vertrees, PhD
Director of Core Modeling Products
Schrödinger, Inc.

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

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October Webinars: Code for Performance
Free Intel webinars can help you accelerate application performance.
Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from 
the latest Intel processors and coprocessors. See abstracts and register >
http://pubads.g.doubleclick.net/gampad/clk?id=60134071&iu=/4140/ostg.clktrk
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