Dear Kanishk,

they shouldn't be empty and you should install the software first. I have never 
done it on Mac but I suppose it is no different than for Windows and linux.
Do not forget to register (see here<http://www.poissonboltzmann.org/> and 
here<http://www.poissonboltzmann.org/docs/downloads/#downloads>) and then you 
can download the files here:
SourceForge<https://sourceforge.net/projects/pdb2pqr/>

Sometimes it is easier and faster to run things online and that can also be 
done (see above; the first link).

Kind regards,
Matic.


On 05. 05. 2017 07:20, Kanishk Jain wrote:
Hello,

I've been using PyMol for sometime now, but I haven't used the APBS plugin 
before. I feel stupid asking this, but should the apbs.py and psize.py files be 
already loaded? As in, should the paths to those files already appear in the 
the program locations tab? Those fields are empty and I'm not sure where the 
files could be. Additionally, I've had a really hard time trying to find those 
files to download.

I'm using PyMol 1.3 on a Mac.

I appreciate any help you guys can provide, thanks!

-Kanishk





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