Hi Gonçalo, Not at all, thanks for your interest! Maybe I can provide that example - here's the link the CellModeller code on GitHub. <https://github.com/HaseloffLab/CellModeller/> Here you can find the setup.py script, which does indeed use the setuptools package. However, I couldn't find CellModeller listed on the PyPI repo <https://pypi.org/>?
What do you think? W Dr. William P J Smith _____________________________________________ Postdoctoral researcher, Foster lab, University of Oxford On Fri, Jan 25, 2019 at 12:46 PM Goncalo Morgado <goncalo.ma...@gmail.com> wrote: > > Apologies for jumping in, do you have an example of a project (link to > repo) that depends on pyopencl and that is distributed through PyPI (uses > setuptools/setup.py), that I could look at? > Having to manually install numpy, pybind11 and mako is a bit of a problem. > With pipenv Pipfile.lock I am able to install everything elegantly, but I > have the problem of putting it in a setup.py... > That would help me a lot. > > Many thanks, > Gonçalo > > > > On Fri, Jan 25, 2019 at 9:27 AM Jerome Kieffer <jerome.kief...@esrf.fr> > wrote: > >> On Fri, 25 Jan 2019 10:00:45 +0000 >> William Smith <willpjsm...@gmail.com> wrote: >> >> > My colleagues and I use PyOpenCL as part of an cell-based modelling >> program >> > (Tim Rudge's CellModeller, here < >> http://haselofflab.github.io/CellModeller/> >> > ). >> > >> > We would like to use CellModeller alongside a PDE Solver (FEniCS >> > <https://fenicsproject.org/>), whose NumPy requirements (>=1.13) >> conflict >> > with those of PyOpenCL (1.9). Is it possible to make PyOpenCL compatible >> > with later NumPy versions? >> > >> > Here's the conflict in my conda environment: >> > >> >> I guess the conflict is related to the conda packaging (poorly done?). >> >> We have no issue to deploy continuous integration of pyopencl 2018.2.2 >> with numpy 1.16: >> >> https://travis-ci.org/silx-kit/pyFAI/jobs/484293593 >> >> As mentioned in a recent thread, numpy, pybind11 and mako have to be >> installed beforehand. >> >> Cheers, >> -- >> Jérôme Kieffer >> _______________________________________________ >> PyOpenCL mailing list -- pyopencl@tiker.net >> To unsubscribe send an email to pyopencl-le...@tiker.net >> > _______________________________________________ > PyOpenCL mailing list -- pyopencl@tiker.net > To unsubscribe send an email to pyopencl-le...@tiker.net >
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