Hi Dat Chu, I missed your message :-)

A Friday 15 October 2010 18:22:54 dattan...@gmail.com escrigué:
> Hello,
> 
> I have ~100 512x512x3 numpy arrays that I currently save on disks as
> png images. If I were to put all these data into one single hdf5
> file, will reading only 1-3 of these arrays incur a full read of the
> entire hdf5 from disk?

No, only the disk space taken by 1-3 arrays will be read.

> 
> My problem is that the file server has problems serving up many small
> files. If I pack all these small files into a single hdf5, the
> overhead of reading will be reduced. However, if reading a single
> array makes the entire dataset be read then what I am doing is
> counter-productive.

Hope this helps,

-- 
Francesc Alted

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